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Stress-induced RNA-chromatin interactions promote endothelial dysfunction.
Calandrelli R, Xu L, Luo Y, Wu W, Fan X, Nguyen T, Chen CJ, Sriram K, Tang X, Burns AB, Natarajan R, Chen ZB, Zhong S. Calandrelli R, et al. Among authors: zhong s. Nat Commun. 2020 Oct 15;11(1):5211. doi: 10.1038/s41467-020-18957-w. Nat Commun. 2020. PMID: 33060583 Free PMC article.
Mapping RNA-RNA interactome and RNA structure in vivo by MARIO.
Nguyen TC, Cao X, Yu P, Xiao S, Lu J, Biase FH, Sridhar B, Huang N, Zhang K, Zhong S. Nguyen TC, et al. Among authors: zhong s. Nat Commun. 2016 Jun 24;7:12023. doi: 10.1038/ncomms12023. Nat Commun. 2016. PMID: 27338251 Free PMC article.
Systematic Mapping of RNA-Chromatin Interactions In Vivo.
Sridhar B, Rivas-Astroza M, Nguyen TC, Chen W, Yan Z, Cao X, Hebert L, Zhong S. Sridhar B, et al. Among authors: zhong s. Curr Biol. 2017 Feb 20;27(4):602-609. doi: 10.1016/j.cub.2017.01.011. Epub 2017 Jan 26. Curr Biol. 2017. PMID: 28132817 Free PMC article.
RNA, Action through Interactions.
Nguyen TC, Zaleta-Rivera K, Huang X, Dai X, Zhong S. Nguyen TC, et al. Among authors: zhong s. Trends Genet. 2018 Nov;34(11):867-882. doi: 10.1016/j.tig.2018.08.001. Epub 2018 Aug 31. Trends Genet. 2018. PMID: 30177410 Free PMC article. Review.
Mapping RNA-chromatin interactions by sequencing with iMARGI.
Wu W, Yan Z, Nguyen TC, Bouman Chen Z, Chien S, Zhong S. Wu W, et al. Among authors: zhong s. Nat Protoc. 2019 Nov;14(11):3243-3272. doi: 10.1038/s41596-019-0229-4. Epub 2019 Oct 16. Nat Protoc. 2019. PMID: 31619811 Free PMC article.
Revealing protein-protein interactions at the transcriptome scale by sequencing.
Johnson KL, Qi Z, Yan Z, Wen X, Nguyen TC, Zaleta-Rivera K, Chen CJ, Fan X, Sriram K, Wan X, Chen ZB, Zhong S. Johnson KL, et al. Among authors: zhong s. Mol Cell. 2021 Oct 7;81(19):4091-4103.e9. doi: 10.1016/j.molcel.2021.07.006. Epub 2021 Aug 3. Mol Cell. 2021. PMID: 34348091 Free PMC article.
GITAR: An Open Source Tool for Analysis and Visualization of Hi-C Data.
Calandrelli R, Wu Q, Guan J, Zhong S. Calandrelli R, et al. Among authors: zhong s. Genomics Proteomics Bioinformatics. 2018 Oct;16(5):365-372. doi: 10.1016/j.gpb.2018.06.006. Epub 2018 Dec 13. Genomics Proteomics Bioinformatics. 2018. PMID: 30553884 Free PMC article.
4,229 results