Cross-linking constraints on F-actin structure

J Mol Biol. 2000 Jun 2;299(2):421-9. doi: 10.1006/jmbi.2000.3727.

Abstract

The DNase I binding loop (residues 38-52), the hydrophobic plug (residues 262-274), and the C terminus region are among the structural elements of monomeric (G-) actin proposed to form the intermonomer interface in F-actin. To test the proximity and interactions of these elements and to provide constraints on models of F-actin structure, cysteine residues were introduced into yeast actin either at residue 41 or 265. These mutations allowed for specific cross-linking of F-actin between C41 and C265, C265 and C374, and C41 and C265 using dibromobimane and disulfide bond formation. The cross-linked products were visualized on SDS-PAGE and by electron microscopy. Model calculations carried out for the cross-linked F-actins revealed that considerable flexibility or displacement of actin residues is required in the disulfide cross-linked segments to fit these filaments into model F-actin structures. The calculated, cross-linked structures showed a better fit to the Holmes rather than the refined Lorenz model of F-actin. It is predicted on the basis of such calculations that image reconstruction of electron micrographs of disulfide cross-linked C41-C374 F-actin should provide a conclusive test of these two similar models of F-actin structure.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Actins / chemistry
  • Actins / genetics
  • Actins / metabolism*
  • Actins / ultrastructure*
  • Amino Acid Substitution / genetics
  • Binding Sites
  • Biopolymers / chemistry
  • Biopolymers / genetics
  • Biopolymers / metabolism
  • Bridged Bicyclo Compounds / metabolism
  • Computer Simulation
  • Copper Sulfate / metabolism
  • Cross-Linking Reagents / metabolism*
  • Cysteine / genetics
  • Cysteine / metabolism
  • Disulfides / metabolism*
  • Electrophoresis, Polyacrylamide Gel
  • Microscopy, Electron
  • Models, Molecular
  • Mutagenesis, Site-Directed / genetics
  • Pliability
  • Protein Binding
  • Protein Structure, Quaternary
  • Yeasts / chemistry*

Substances

  • Actins
  • Biopolymers
  • Bridged Bicyclo Compounds
  • Cross-Linking Reagents
  • Disulfides
  • dibromobimane
  • Cysteine
  • Copper Sulfate