Probing the structure of F-actin: cross-links constrain atomic models and modify actin dynamics

J Mol Biol. 2001 Sep 7;312(1):95-106. doi: 10.1006/jmbi.2001.4945.

Abstract

Cross-links between protomers in F-actin can be used as a very sensitive probe of both the dynamics and structure of F-actin. We have characterized filaments formed from a previously described yeast actin Q41C mutant, where disulfide bonds can be formed between the Cys41 that is introduced into subdomain-2 and Cys374 on an adjacent protomer. We find that the distribution of cross-linked n-mers shows no cooperativity and corresponds to a random probability cross-linking reaction. The random distribution suggests that disulfide formation does not cause a significant perturbation of the F-actin structure. Consistent with this lack of perturbation, three-dimensional reconstructions of extensively cross-linked filaments, using a new approach to helical image analysis, show very small structural changes with respect to uncross-linked filaments. This finding is in conflict with refined models but in agreement with the original Holmes et al. model for F-actin. Under conditions where 94 % of the protomers are linked by disulfide bonds, the distribution of filament twist becomes more heterogeneous with respect to control filaments. A molecular model suggests that strain, introduced by the disulfide, is relieved by increasing the twist of the long-pitch actin helices. Disulfide formation makes yeast actin filaments approximately three times less flexible in terms of bending and similar, in this respect, to vertebrate skeletal muscle F-actin. These observations support previous reports that the rigidity of F-actin can be controlled by the position of subdomain-2, and that this region is more flexible in yeast F-actin than in skeletal muscle F-actin.

Publication types

  • Comparative Study
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Actins / chemistry*
  • Actins / genetics
  • Actins / metabolism
  • Algorithms
  • Animals
  • Deoxyribonuclease I / metabolism
  • Disulfides / chemistry
  • Image Processing, Computer-Assisted
  • Microscopy, Electron
  • Models, Molecular
  • Models, Statistical
  • Muscle, Skeletal / chemistry
  • Mutation
  • Protein Conformation
  • Yeasts / chemistry

Substances

  • Actins
  • Disulfides
  • Deoxyribonuclease I