Solution structure of the cyclotide palicourein: implications for the development of a pharmaceutical framework

Structure. 2004 Jan;12(1):85-94. doi: 10.1016/j.str.2003.11.019.

Abstract

The cyclotides are a family of disulfide-rich proteins from plants. They have the characteristic structural features of a circular protein backbone and a knotted arrangement of disulfide bonds. Structural and biochemical studies of the cyclotides suggest that their unique physiological stability can be loaned to bioactive peptide fragments for pharmaceutical and agricultural development. In particular, the cyclotides incorporate a number of solvent-exposed loops that are potentially suitable for epitope grafting applications. Here, we determine the structure of the largest known cyclotide, palicourein, which has an atypical size and composition within one of the surface-exposed loops. The structural data show that an increase in size of a palicourein loop does not perturb the core fold, to which the thermodynamic and chemical stability has been attributed. The cyclotide core fold, thus, can in principle be used as a framework for the development of useful pharmaceutical and agricultural bioactivities.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Cyclotides*
  • Models, Molecular*
  • Molecular Sequence Data
  • Nuclear Magnetic Resonance, Biomolecular
  • Peptides, Cyclic / chemistry*
  • Pharmaceutical Preparations
  • Plant Proteins / chemistry
  • Protein Structure, Secondary
  • Rubiaceae / chemistry*
  • Sequence Homology, Amino Acid

Substances

  • Cyclotides
  • Peptides, Cyclic
  • Pharmaceutical Preparations
  • Plant Proteins
  • kalata B1
  • palicourein
  • circulin A

Associated data

  • PDB/1R1F