Reevaluation and reduction of a PCR bias caused by reannealing of templates

Appl Environ Microbiol. 2004 Dec;70(12):7545-9. doi: 10.1128/AEM.70.12.7545-7549.2004.

Abstract

We reevaluated the bias toward a 1:1 ratio of products in multitemplate PCR used in ecological studies and showed that the template reannealing at the annealing step would not cause the bias; however, the preferential homoduplex formation during temperature decrease from denaturation to annealing step would cause the bias.

Publication types

  • Evaluation Study

MeSH terms

  • Actinomycetales / genetics
  • Bias*
  • Nucleic Acid Denaturation
  • Nucleic Acid Hybridization
  • Polymerase Chain Reaction / methods*
  • Pseudomonas fluorescens / genetics
  • RNA, Ribosomal, 16S / genetics
  • Temperature
  • Templates, Genetic*

Substances

  • RNA, Ribosomal, 16S