Linkage but not association of calpain-10 to type 2 diabetes replicated in northern Sweden

Diabetes. 2006 Jun;55(6):1879-83. doi: 10.2337/db05-1495.

Abstract

We present data from a genome-wide scan identifying genetic factors conferring susceptibility to type 2 diabetes. The linkage analysis was based on 59 families from northern Sweden, consisting of a total of 129 cases of type 2 diabetes and 19 individuals with impaired glucose tolerance. Model-free linkage analysis revealed a maximum multipoint logarithm of odds score of 3.19 for D2S2987 at 267.7 cM (P=0.00058), suggesting that a gene conferring susceptibility to type 2 diabetes in the northern Swedish population resides in the 2q37 region. These data replicate, in a European population, previously identified linkage of marker loci in this region to type 2 diabetes in Mexican Americans. In contrast, no evidence in support of association to the previously identified single nucleotide polymorphisms in the calpain-10 gene was observed in a case-control cohort derived from the same population.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Alleles
  • Calpain / genetics*
  • Diabetes Mellitus, Type 2 / genetics*
  • Gene Frequency
  • Genetic Linkage*
  • Genetic Predisposition to Disease
  • Genome, Human
  • Genotype
  • Glucose Intolerance / genetics
  • Haplotypes
  • Humans
  • Lod Score
  • Logistic Models
  • Middle Aged
  • Polymorphism, Single Nucleotide
  • Sweden
  • White People / genetics*

Substances

  • Calpain
  • calpain 10