SCRF-DFT and NMR comparison of tetracycline and 5a,6-anhydrotetracycline in solution

J Phys Chem B. 2006 Dec 7;110(48):24766-74. doi: 10.1021/jp064457s.

Abstract

A combination of structures, energies, and spectral data calculated using density functional theory (DFT) with experimental NMR data has been used to assign conformational equilibria for tetracycline and 5a,6-anhydrotetracycline in water at pH 1, 7, and 10 and in chloroform (5a,6-anhydrotetracycline) and methanol (tetracycline). The results suggest that tetracycline always prefers the extended conformation but that 5a,6-anhydrotetracycline exists in water as a mixture of the two conformers and in chloroform exclusively in the twisted conformation. The conformational equilibria are also shown to be pH dependent.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Computer Simulation
  • Hydrogen Bonding
  • Magnetic Resonance Spectroscopy
  • Models, Chemical*
  • Models, Molecular
  • Molecular Conformation
  • Protons
  • Solutions / chemistry
  • Solvents
  • Tetracyclines / chemistry*

Substances

  • Protons
  • Solutions
  • Solvents
  • Tetracyclines