Identification of bacteria associated with spreading odontogenic infections by 16S rRNA gene sequencing

Oral Surg Oral Med Oral Pathol Oral Radiol Endod. 2007 May;103(5):610-7. doi: 10.1016/j.tripleo.2006.08.009. Epub 2006 Nov 30.

Abstract

Objective: To determine the bacterial species associated with spreading odontogenic infections (SOIs).

Study design: Pus samples from 4 cases of SOI were analyzed by microbiological culture methods for the presence of bacteria, and by polymerase chain reaction (PCR) amplification, cloning, and sequencing of bacterial 16S rRNA genes.

Results: Culture methods identified species from the genera Prevotella, Streptococcus, and Fusobacterium, as well as anaerobic streptococci. Molecular detection methods identified a far more diverse microflora. The predominant genus detected was Prevotella, representing 102 (50.2%) of 203 clones analyzed. Prevotella oris was the most abundant species identified, representing 45 (22.2%) of 203 clones analyzed. Twelve clones (5.9%) represented uncultivable species, namely Prevotella PUS9.180, an uncultured Peptostreptococcus species, and an uncultured bacterium belonging to the Bacteroidetes phylum.

Conclusions: Prevotella species may play an important role in SOIs, and further work to examine in more detail the pathogenicity determinants of these organisms and associated host responses is warranted.

MeSH terms

  • Adolescent
  • Adult
  • Bacterial Typing Techniques*
  • Colony Count, Microbial
  • DNA, Bacterial / analysis
  • Female
  • Focal Infection, Dental / microbiology*
  • Gram-Negative Anaerobic Straight, Curved, and Helical Rods / pathogenicity
  • Humans
  • Male
  • Polymerase Chain Reaction
  • Porphyromonas / pathogenicity
  • Prevotella / pathogenicity*
  • RNA, Ribosomal, 16S / analysis
  • Sequence Analysis, DNA
  • Suppuration / microbiology

Substances

  • DNA, Bacterial
  • RNA, Ribosomal, 16S