A loss-of-function screen reveals SNX5 and SNX6 as potential components of the mammalian retromer

J Cell Sci. 2007 Jan 1;120(Pt 1):45-54. doi: 10.1242/jcs.03302. Epub 2006 Dec 5.

Abstract

The mammalian retromer is a multimeric protein complex involved in mediating endosome-to-trans-Golgi-network retrograde transport of the cation-independent mannose-6-phosphate receptor. The retromer is composed of two subcomplexes, one containing SNX1 and forming a membrane-bound coat, the other comprising VPS26, VPS29 and VPS35 and being cargo-selective. In yeast, an additional sorting nexin--Vps17p--is a component of the membrane bound coat. It remains unclear whether the mammalian retromer requires a functional equivalent of Vps17p. Here, we have used an RNAi loss-of-function screen to examine whether any of the other 30 mammalian sorting nexins are required for retromer-mediated endosome-to-trans-Golgi-network retrieval of the cation-independent mannose-6-phosphate receptor. Using this screen, we identified two proteins, SNX5 and SNX6, that, when suppressed, induced a phenotype similar to that observed upon suppression of known retromer components. Whereas SNX5 and SNX6 colocalised with SNX1 on early endosomes, in immunoprecipitation experiments only SNX6 appeared to exist in a complex with SNX1. Interestingly, suppression of SNX5 and/or SNX6 resulted in a significant loss of SNX1, an effect that seemed to result from post-translational regulation of the SNX1 level. Such data suggest that SNX1 and SNX6 exist in a stable, endosomally associated complex that is required for retromer-mediated retrieval of the cation-independent mannose-6-phosphate receptor. SNX5 and SNX6 may therefore constitute functional equivalents of Vps17p in mammals.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carrier Proteins / genetics
  • Carrier Proteins / metabolism*
  • Endosomes / metabolism*
  • Gene Expression / physiology
  • Genetic Testing
  • Green Fluorescent Proteins / genetics
  • HeLa Cells
  • Humans
  • Immunoprecipitation
  • Microscopy, Confocal
  • Protein Transport / physiology*
  • RNA Interference
  • Sorting Nexins
  • Vesicular Transport Proteins / genetics
  • Vesicular Transport Proteins / metabolism*
  • trans-Golgi Network / metabolism*

Substances

  • Carrier Proteins
  • SNX1 protein, human
  • SNX5 protein, human
  • SNX6 protein, human
  • Sorting Nexins
  • Vesicular Transport Proteins
  • Green Fluorescent Proteins