Design and cloning of lentiviral vectors expressing small interfering RNAs

Nat Protoc. 2006;1(1):234-40. doi: 10.1038/nprot.2006.36.

Abstract

RNA interference (RNAi) has emerged as a powerful technique to downregulate gene expression. The use of polIII promoters to express small hairpin RNAs (shRNAs), combined with the versatility and robustness of lentiviral vector-mediated gene delivery to a wide range of cell types offers the possibility of long-term downregulation of specific target genes both in vitro and in vivo. The use of silencing lentivectors allows for a rapid and convenient way of establishing cell lines (or transgenic mice) that stably express shRNAs for analysis of phenotypes produced by knockdown of a gene product. Here we present two possible protocols describing the design and cloning of silencing lentiviral vectors. These protocols can be completed in less than 3 weeks.

MeSH terms

  • Cloning, Molecular / methods*
  • Gene Transfer Techniques
  • Genetic Vectors*
  • Lentivirus / genetics*
  • RNA Interference*
  • RNA, Small Interfering / genetics*
  • RNA, Small Interfering / metabolism

Substances

  • RNA, Small Interfering