PROMOT: modular modeling for systems biology

Bioinformatics. 2009 Mar 1;25(5):687-9. doi: 10.1093/bioinformatics/btp029. Epub 2009 Jan 15.

Abstract

Summary: The modeling tool PROMOT facilitates the efficient and comprehensible setup and editing of modular models coupled with customizable visual representations. Since its last major publication in 2003, PROMOT has gained new functionality in particular support of logical models, efficient editing, visual exploration, model validation and support for SBML.

Availability: PROMOT is an open source project and freely available at http://www.mpi-magdeburg.mpg.de/projects/promot/.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Computational Biology / methods*
  • Computer Graphics*
  • Databases, Factual
  • Logistic Models
  • Models, Biological
  • Software*
  • Systems Biology / methods*
  • User-Computer Interface