Two-dimensional concurrent HMQC-COSY as an approach for small molecule chemical shift assignment and compound identification

J Biomol NMR. 2011 Apr;49(3-4):291-6. doi: 10.1007/s10858-011-9494-4. Epub 2011 Mar 4.

Abstract

Chemical shift assignment is the first step toward the structure elucidation of natural products and other chemical compounds. We propose here the use of 2D concurrent HMQC-COSY as an experiment for rapid chemical shift assignment of small molecules. This experiment provides well-dispersed (1)H-(13)C peak patterns that are distinctive for different functional groups plus (1)H-(1)H COSY connectivities that serve to identify adjacent groups. The COSY diagonal peaks, which are phased to be absorptive, resemble (1)H-(13)C HMQC cross peaks. We demonstrate the applicability of this experiment for rapidly and unambiguously establishing correlations between different functional groups through the analysis of the spectrum of a metabolite (jasmonic acid) dissolved in CDCl(3). In addition, we show that the experiment can be used to assign spectra of compounds in a mixture of metabolites in D(2)O.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Carbon Isotopes
  • Cyclopentanes
  • Magnetic Resonance Spectroscopy / methods*
  • Methods
  • Organic Chemicals / chemistry*
  • Oxylipins
  • Protons
  • Solvents

Substances

  • Carbon Isotopes
  • Cyclopentanes
  • Organic Chemicals
  • Oxylipins
  • Protons
  • Solvents
  • jasmonic acid