Zygotic amplification of secondary piRNAs during silkworm embryogenesis

RNA. 2011 Jul;17(7):1401-7. doi: 10.1261/rna.2709411. Epub 2011 May 31.

Abstract

PIWI-interacting RNAs (piRNAs) are 23-30-nucleotide-long small RNAs that act as sequence-specific silencers of transposable elements in animal gonads. In flies, genetics and deep sequencing data have led to a hypothesis for piRNA biogenesis called the ping-pong cycle, where antisense primary piRNAs initiate an amplification loop to generate sense secondary piRNAs. However, to date, the process of the ping-pong cycle has never been monitored at work. Here, by large-scale profiling of piRNAs from silkworm ovary and embryos of different developmental stages, we demonstrate that maternally inherited antisense-biased piRNAs trigger acute amplification of secondary sense piRNA production in zygotes, at a time coinciding with zygotic transcription of sense transposon mRNAs. These results provide on-site evidence for the ping-pong cycle.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Bombyx / embryology*
  • Bombyx / genetics*
  • Cluster Analysis
  • Embryo, Nonmammalian
  • Embryonic Development / genetics
  • Embryonic Development / physiology
  • Female
  • Gene Amplification / physiology*
  • Gene Expression Profiling
  • Gene Expression Regulation, Developmental
  • Microarray Analysis
  • Models, Biological
  • Molecular Sequence Data
  • RNA, Messenger, Stored / analysis
  • RNA, Messenger, Stored / genetics
  • RNA, Messenger, Stored / metabolism
  • RNA, Small Interfering / genetics*
  • RNA, Small Interfering / metabolism
  • Zygote / metabolism*

Substances

  • RNA, Messenger, Stored
  • RNA, Small Interfering

Associated data

  • GENBANK/DRA00017
  • GENBANK/DRA00031