Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development

BMC Med Genet. 2011 Dec 5:12:156. doi: 10.1186/1471-2350-12-156.

Abstract

Background: Human chromosomal region 8q24 contains several genes which could be functionally related to cancer, including the proto-oncogene c-MYC. However, the abundance of associations around 128 Mb on chromosome 8 could mask the appearance of a weaker, but important, association elsewhere on 8q24.

Methods: In this study, we completed a meta-analysis of results from nine genome-wide association studies for seven types of solid-tumor cancers (breast, prostate, pancreatic, lung, ovarian, colon, and glioma) to identify additional associations that were not apparent in any individual study.

Results: Fifteen SNPs in the 8q24 region had meta-analysis p-values < 1E-04. In particular, the region consisting of 120,576,000-120,627,000 bp contained 7 SNPs with p-values < 1.0E-4, including rs6993464 (p = 1.25E-07). This association lies in the region between two genes, NOV and ENPP2, which have been shown to play a role in tumor development and motility. An additional region consisting of 5 markers from 128,478,000 bp - 128,524,000 (around gene POU5F1B) had p-values < 1E-04, including rs6983267, which had the smallest p-value (p = 6.34E-08). This result replicates previous reports of association between rs6983267 and prostate and colon cancer.

Conclusions: Further research in this area is warranted as these results demonstrate that the chromosomal region 8q24 may contain a locus that influences general cancer susceptibility between 120,576 and 120,630 kb.

Publication types

  • Meta-Analysis
  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chromosomes, Human, Pair 8*
  • Disease Progression
  • Genetic Loci
  • Genome-Wide Association Study*
  • Humans
  • Neoplasms / genetics*
  • Nephroblastoma Overexpressed Protein / genetics
  • Phosphoric Diester Hydrolases / genetics
  • Polymorphism, Single Nucleotide
  • Proto-Oncogene Mas

Substances

  • CCN3 protein, human
  • MAS1 protein, human
  • Nephroblastoma Overexpressed Protein
  • Proto-Oncogene Mas
  • Phosphoric Diester Hydrolases
  • alkylglycerophosphoethanolamine phosphodiesterase