An extended spectrum of target proteins and modification sites in the general O-linked protein glycosylation system in Neisseria gonorrhoeae

J Proteome Res. 2012 Dec 7;11(12):5781-93. doi: 10.1021/pr300584x. Epub 2012 Oct 29.

Abstract

The bacterial human pathogen Neisseria gonorrhoeae expresses a general O-linked protein glycosylation (Pgl) system known to target at least 12 membrane-associated proteins. To facilitate a better understanding of the mechanisms, significance and function of this glycosylation system, we sought to further delineate the target proteome of the Pgl system. To this end, we employed immunoaffinity enrichment of glycoproteins using a monoclonal antibody against the glycan moiety. Enzymatically generated peptides were subsequently analyzed by MS to identify glycopeptides and glycosylation sites. In this way, we increase the total number of known glycoproteins in N. gonorrhoeae to 19. These new glycoproteins are involved in a wide variety of extracytoplasmic functions. By employing collision fragmentation, we mapped nine new glycosylation sites, all of which were serine. No target sequon was readily apparent, although attachment sites were most often localized with regions of low sequence complexity. Moreover, we found that 5 of the proteins were modified with more than one glycan. This work thus confirms and extends earlier observations on the structural features of Neisseria glycoproteins.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / analysis*
  • Bacterial Proteins / chemistry
  • Binding Sites
  • Computational Biology / methods
  • Databases, Genetic
  • Glycopeptides / analysis*
  • Glycopeptides / chemistry
  • Glycosylation
  • Immunoprecipitation
  • Mass Spectrometry
  • Molecular Sequence Data
  • Neisseria gonorrhoeae / chemistry*
  • Polysaccharides / analysis
  • Polysaccharides / chemistry
  • Proteome / analysis*
  • Proteome / chemistry
  • Proteomics / methods
  • Serine / chemistry

Substances

  • Bacterial Proteins
  • Glycopeptides
  • Polysaccharides
  • Proteome
  • Serine