Phosphorylation-dependent conformational changes and domain rearrangements in Staphylococcus aureus VraR activation

Proc Natl Acad Sci U S A. 2013 May 21;110(21):8525-30. doi: 10.1073/pnas.1302819110. Epub 2013 May 6.

Abstract

Staphylococcus aureus VraR, a vancomycin-resistance-associated response regulator, activates a cell-wall-stress stimulon in response to antibiotics that inhibit cell wall formation. X-ray crystal structures of VraR in both unphosphorylated and beryllofluoride-activated states have been determined, revealing a mechanism of phosphorylation-induced dimerization that features a deep hydrophobic pocket at the center of the receiver domain interface. Unphosphorylated VraR exists in a closed conformation that inhibits dimer formation. Phosphorylation at the active site promotes conformational changes that are propagated throughout the receiver domain, promoting the opening of a hydrophobic pocket that is essential for homodimer formation and enhanced DNA-binding activity. This prominent feature in the VraR dimer can potentially be exploited for the development of novel therapeutics to counteract antibiotic resistance in this important pathogen.

Keywords: antimicrobial drug target; methicillin-resistant Staphylococcus aureus; transcription factor; two-component system; vancomycin resistance.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Crystallography, X-Ray
  • DNA-Binding Proteins / chemistry*
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism
  • Drug Resistance, Bacterial / physiology
  • Phosphorylation / physiology
  • Protein Multimerization*
  • Protein Structure, Quaternary
  • Protein Structure, Tertiary
  • Staphylococcus aureus / chemistry*
  • Staphylococcus aureus / genetics
  • Staphylococcus aureus / metabolism

Substances

  • Bacterial Proteins
  • DNA-Binding Proteins
  • VraR protein, Staphylococcus aureus

Associated data

  • PDB/4GVP
  • PDB/4IF4