Mass spectrometry-based metabolomics of single yeast cells

Proc Natl Acad Sci U S A. 2013 May 28;110(22):8790-4. doi: 10.1073/pnas.1209302110. Epub 2013 May 13.

Abstract

Single-cell level measurements are necessary to characterize the intrinsic biological variability in a population of cells. In this study, we demonstrate that, with the microarrays for mass spectrometry platform, we are able to observe this variability. We monitor environmentally (2-deoxy-D-glucose) and genetically (ΔPFK2) perturbed Saccharomyces cerevisiae cells at the single-cell, few-cell, and population levels. Correlation plots between metabolites from the glycolytic pathway, as well as with the observed ATP/ADP ratio as a measure of cellular energy charge, give biological insight that is not accessible from population-level metabolomic data.

Keywords: MALDI mass spectrometry; baker's yeast; single-cell measurements.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Count
  • Deoxyglucose
  • Glycolysis / physiology*
  • Linear Models
  • Metabolomics / methods*
  • Microarray Analysis / methods
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae / physiology*
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / methods*

Substances

  • Deoxyglucose