The evolutionary portrait of metazoan NAD salvage

PLoS One. 2013 May 28;8(5):e64674. doi: 10.1371/journal.pone.0064674. Print 2013.

Abstract

Nicotinamide Adenine Dinucleotide (NAD) levels are essential for cellular homeostasis and survival. Main sources of intracellular NAD are the salvage pathways from nicotinamide, where Nicotinamide phosphoribosyltransferases (NAMPTs) and Nicotinamidases (PNCs) have a key role. NAMPTs and PNCs are important in aging, infection and disease conditions such as diabetes and cancer. These enzymes have been considered redundant since either one or the other exists in each individual genome. The co-occurrence of NAMPT and PNC was only recently detected in invertebrates though no structural or functional characterization exists for them. Here, using expression and evolutionary analysis combined with homology modeling and protein-ligand docking, we show that both genes are expressed simultaneously in key species of major invertebrate branches and emphasize sequence and structural conservation patterns in metazoan NAMPT and PNC homologues. The results anticipate that NAMPTs and PNCs are simultaneously active, raising the possibility that NAD salvage pathways are not redundant as both are maintained to fulfill the requirement for NAD production in some species.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Motifs / genetics
  • Amino Acid Sequence
  • Animals
  • Biosynthetic Pathways / genetics*
  • Conserved Sequence / genetics
  • Evolution, Molecular*
  • Humans
  • Hydrogen Bonding
  • Hydrophobic and Hydrophilic Interactions
  • Invertebrates / enzymology
  • Molecular Docking Simulation
  • Molecular Sequence Data
  • NAD / metabolism*
  • Nicotinamidase / chemistry
  • Nicotinamide Phosphoribosyltransferase / chemistry
  • Phylogeny
  • Protein Structure, Secondary
  • Sequence Homology, Amino Acid
  • Structural Homology, Protein

Substances

  • NAD
  • Nicotinamide Phosphoribosyltransferase
  • Nicotinamidase

Grants and funding

This work was supported by the Portuguese Foundation for Science and Technology (PTDC/BIA-PRO/099888/2008). IPATIMUP is an Associate Laboratory of the Portuguese Ministry of Education and Science, and is partially supported by FCT. LA and RMS are supported by FCT Ciência2007 (Hiring of PhDs for the SCTN - financed by POPH - QREN - Typology 4.2 - Promoting Scientific Employment, co-financed by MES national funding and The European Social Fund). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.