A masked PY-NLS in Drosophila TIS11 and its mammalian homolog tristetraprolin

PLoS One. 2013 Aug 9;8(8):e71686. doi: 10.1371/journal.pone.0071686. eCollection 2013.

Abstract

Many RNA-binding proteins (RBPs) dynamically shuttle between the nucleus and the cytoplasm, often exerting different functions in each compartment. Therefore, the nucleo-cytoplasmic distribution of RBPs has a strong impact on their activity. Here we describe the localization and the shuttling properties of the tandem zinc finger RBP dTIS11, which is the Drosophila homolog of mammalian TIS11 proteins. Drosophila and mammalian TIS11 proteins act as destabilizing factors in ARE-mediated decay. At equilibrium, dTIS11 is concentrated mainly in the cytoplasm. We show that dTIS11 is a nucleo-cytoplasmic shuttling protein whose nuclear export is mediated by the exportin CRM1 through the recognition of a nuclear export signal (NES) located in a different region comparatively to its mammalian homologs. We also identify a cryptic Transportin-dependent PY nuclear localization signal (PY-NLS) in the tandem zinc finger region of dTIS11 and show that it is conserved across the TIS11 protein family. This NLS partially overlaps the second zinc finger ZnF2. Importantly, mutations disrupting the capacity of the ZnF2 to coordinate a Zinc ion unmask dTIS11 and TTP NLS and promote nuclear import. All together, our results indicate that the nuclear export of TIS11 proteins is mediated by CRM1 through diverging NESs, while their nuclear import mechanism may rely on a highly conserved PY-NLS whose activity is negatively regulated by ZnF2 folding.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Active Transport, Cell Nucleus / genetics
  • Amino Acid Sequence
  • Animals
  • Cell Nucleus / metabolism
  • Conserved Sequence
  • Cytoplasm / metabolism
  • Drosophila Proteins / genetics
  • Drosophila Proteins / metabolism*
  • Drosophila melanogaster / genetics
  • Drosophila melanogaster / metabolism*
  • Exportin 1 Protein
  • Gene Expression Regulation
  • Humans
  • Karyopherins / genetics
  • Karyopherins / metabolism*
  • Kruppel-Like Transcription Factors / genetics
  • Kruppel-Like Transcription Factors / metabolism*
  • Molecular Sequence Data
  • Protein Folding
  • Protein Sorting Signals
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Receptors, Cytoplasmic and Nuclear / genetics
  • Receptors, Cytoplasmic and Nuclear / metabolism*
  • Sequence Homology, Amino Acid
  • Signal Transduction
  • Tristetraprolin / genetics
  • Tristetraprolin / metabolism
  • Zinc Fingers / genetics

Substances

  • Drosophila Proteins
  • Karyopherins
  • Kruppel-Like Transcription Factors
  • Protein Sorting Signals
  • RNA-Binding Proteins
  • Receptors, Cytoplasmic and Nuclear
  • Tis11 protein, Drosophila
  • Tristetraprolin

Grants and funding

This work was supported by the Fund for Medical Scientific Research (Belgium, grant 2.4.511.00.F), the Fonds Brachet and Van Buuren, the “Actions de Recherches Concertées” (grants AV.06/11-345) and the FEDER program (2008-2013) of the Walloon region. L. Twyffels and R. Soin were funded by the “Fonds National de la Recherche Scientifique” (FNRS, Brussels, Belgium). C. Decaestecker is a Senior Research Associate with the “Fonds National de la Recherche Scientifique” (FNRS, Brussels, Belgium). The CMMI is supported by the European Regional Development Fund and the Walloon Region. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.