A genetic polymorphism in pre-miR-27a confers clinical outcome of non-small cell lung cancer in a Chinese population

PLoS One. 2013 Nov 6;8(11):e79135. doi: 10.1371/journal.pone.0079135. eCollection 2013.

Abstract

Background: Recent evidence indicates that microRNAs (miRNAs) can function as tumor suppressors and oncogenes. Single nucleotide polymorphisms (SNPs) at miRNA genes can influence the maturation of miRNAs or miRNA-mediated transcriptional regulation. Our objective was to investigate the association of SNPs in deregulated miRNAs with clinical outcome in patients with non-small cell lung cancer (NSCLC) in a Chinese population.

Methods: Deregulated miRNAs in NSCLC and their SNPs were identified through public databases. A single SNP, rs895819 in pre-miR-27a, was found suitable for selection. TaqMan assays were performed for genotyping and to assess the effect on the overall survival (OS) and chemotherapy response in 576 NSCLC patients.

Results: Log-rank test and Cox regression analysis indicated that the G allele of rs895819 was associated with shorter survival and increased risk of death in NSCLC [dominant model: 22.0 vs. 46.0 months, P<0.001; adjusted hazard ratio (HR) = 1.71, 95% confidential interval (CI): 1.12-2.26]. Further stepwise regression analysis suggested that this SNP was an independently unfavorable factor for the prognosis of NSCLC and the effect remained significant in subgroup analysis stratified by clinical parameters and treatment status. Moreover, multivariate logistic regression analysis showed that the subjects with AG/GG genotypes of rs895819 had significantly decreased response rate to platinum-based chemotherapy compared to those with the AA genotype.

Conclusion: Our results suggest that the pre-miR-27a rs895819 polymorphism may influence NSCLC patients' clinical outcome. Further large sample studies should be used to validate our findings.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antineoplastic Combined Chemotherapy Protocols / therapeutic use
  • Asian People / genetics
  • Carboplatin / administration & dosage
  • Carcinoma, Non-Small-Cell Lung / drug therapy
  • Carcinoma, Non-Small-Cell Lung / ethnology
  • Carcinoma, Non-Small-Cell Lung / genetics*
  • China
  • Cisplatin / administration & dosage
  • Female
  • Gene Frequency
  • Genotype
  • Humans
  • Kaplan-Meier Estimate
  • Logistic Models
  • Lung Neoplasms / drug therapy
  • Lung Neoplasms / ethnology
  • Lung Neoplasms / genetics*
  • Male
  • MicroRNAs / genetics*
  • Middle Aged
  • Multivariate Analysis
  • Outcome Assessment, Health Care / statistics & numerical data
  • Polymorphism, Single Nucleotide*
  • Prognosis
  • Proportional Hazards Models
  • RNA Precursors / genetics

Substances

  • MIRN27 microRNA, human
  • MicroRNAs
  • RNA Precursors
  • Carboplatin
  • Cisplatin

Grants and funding

This work was supported by National Natural Science Foundation of China (81172140, 81272532) and the Priority Academic Program Development of Jiangsu Higher Education Institutions (JX10231801). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.