Factor-independent termination of transcription in a stretch of deoxyadenosine residues in the template DNA

Cell. 1987 Nov 20;51(4):623-30. doi: 10.1016/0092-8674(87)90131-0.

Abstract

The primer transcript of plasmid ColE1 extends beyond the replication origin in either of two different modes. It does or does not form a hybrid with the template DNA. When a stretch of 20 deoxyadenosine residues is inserted into the template strand downstream of the origin, more than 90% of hybridized transcripts and about 10% of unhybridized transcripts terminate at the insert. When the number of inserted residues is reduced to ten, the corresponding values are decreased considerably, while the sites of termination are almost unchanged. A palindrome immediately before the stretch increased the efficiency of termination of unhybridized transcripts. Upon termination of hybridized transcripts, RNA polymerase detaches from the template. A structure made by a hybrid or by folded RNA may affect a property of transcription, and a stretch of deoxyadenosine residues including those beyond the actual site of termination may facilitate detachment of RNA polymerase from the template DNA.

MeSH terms

  • Bacteriocin Plasmids
  • Base Sequence
  • DNA, Bacterial / genetics*
  • DNA-Directed RNA Polymerases / metabolism
  • Deoxyadenosines
  • Escherichia coli / genetics*
  • Genes, Regulator*
  • Nucleic Acid Conformation
  • RNA, Bacterial / biosynthesis
  • Templates, Genetic
  • Terminator Regions, Genetic*
  • Transcription, Genetic*

Substances

  • DNA, Bacterial
  • Deoxyadenosines
  • RNA, Bacterial
  • DNA-Directed RNA Polymerases