Coxsackievirus cloverleaf RNA containing a 5' triphosphate triggers an antiviral response via RIG-I activation

PLoS One. 2014 Apr 23;9(4):e95927. doi: 10.1371/journal.pone.0095927. eCollection 2014.

Abstract

Upon viral infections, pattern recognition receptors (PRRs) recognize pathogen-associated molecular patterns (PAMPs) and stimulate an antiviral state associated with the production of type I interferons (IFNs) and inflammatory markers. Type I IFNs play crucial roles in innate antiviral responses by inducing expression of interferon-stimulated genes and by activating components of the adaptive immune system. Although pegylated IFNs have been used to treat hepatitis B and C virus infections for decades, they exert substantial side effects that limit their use. Current efforts are directed toward the use of PRR agonists as an alternative approach to elicit host antiviral responses in a manner similar to that achieved in a natural infection. RIG-I is a cytosolic PRR that recognizes 5' triphosphate (5'ppp)-containing RNA ligands. Due to its ubiquitous expression profile, induction of the RIG-I pathway provides a promising platform for the development of novel antiviral agents and vaccine adjuvants. In this study, we investigated whether structured RNA elements in the genome of coxsackievirus B3 (CVB3), a picornavirus that is recognized by MDA5 during infection, could activate RIG-I when supplied with 5'ppp. We show here that a 5'ppp-containing cloverleaf (CL) RNA structure is a potent RIG-I inducer that elicits an extensive antiviral response that includes induction of classical interferon-stimulated genes, as well as type III IFNs and proinflammatory cytokines and chemokines. In addition, we show that prophylactic treatment with CVB3 CL provides protection against various viral infections including dengue virus, vesicular stomatitis virus and enterovirus 71, demonstrating the antiviral efficacy of this RNA ligand.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antiviral Agents / pharmacology*
  • Antiviral Agents / therapeutic use
  • Cell Line
  • Cytokines / metabolism
  • DEAD-box RNA Helicases / metabolism
  • Fibroblasts / cytology
  • Fibroblasts / immunology
  • Fibroblasts / virology
  • HeLa Cells
  • Humans
  • Mice
  • Models, Molecular
  • Nucleic Acid Conformation
  • Picornaviridae / chemistry
  • Picornaviridae / genetics*
  • Picornaviridae / immunology
  • Polyphosphates / pharmacology
  • RNA Virus Infections / immunology*
  • RNA Virus Infections / prevention & control
  • RNA Virus Infections / virology
  • RNA, Viral / chemistry*
  • RNA, Viral / immunology
  • RNA, Viral / metabolism
  • RNA, Viral / pharmacology
  • RNA, Viral / therapeutic use
  • Receptors, Retinoic Acid / genetics
  • Receptors, Retinoic Acid / metabolism*

Substances

  • 5'PPP-RNA
  • Antiviral Agents
  • Cytokines
  • Polyphosphates
  • RNA, Viral
  • Receptors, Retinoic Acid
  • DEAD-box RNA Helicases
  • triphosphoric acid

Grants and funding

Q.F. is supported by Mosaic grants (NWO-017.006.043), M.A.L. by a Rubicon grant (NWO-825.11.022), and F.V.K. by an ECHO grant (NWO-CW-700.59.007), all from the Netherlands Organisation for Scientific Research (NWO). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.