A rapid qPCR method for genetic sex identification of Salmo salar and Salmo trutta including simultaneous elucidation of interspecies hybrid paternity by high-resolution melt analysis

J Fish Biol. 2014 Jun;84(6):1971-7. doi: 10.1111/jfb.12401. Epub 2014 May 9.

Abstract

This study presents an improved duplex quantitative polymerase chain reaction (qPCR) method using the master sex-determining gene sdY as a marker for simultaneous genetic sex identification of salmonids of the Salmo genus and paternity elucidation for Salmo salar × Salmo trutta hybrids. This method will provide a new, simple and economical molecular tool for ecological studies of these species as well as for aquaculture purposes.

Keywords: aquaculture; fish ecology; molecular diagnostic; molecular sexing; sdY gene; species substitution.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Chimera / genetics*
  • Female
  • Genetic Markers
  • Male
  • Molecular Sequence Data
  • Polymerase Chain Reaction*
  • Polymorphism, Single Nucleotide
  • Salmonidae / genetics*
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Sex Determination Analysis / methods*

Substances

  • Genetic Markers