Phenyl-1-Pyridin-2yl-ethanone-based iron chelators increase IκB-α expression, modulate CDK2 and CDK9 activities, and inhibit HIV-1 transcription

Antimicrob Agents Chemother. 2014 Nov;58(11):6558-71. doi: 10.1128/AAC.02918-14. Epub 2014 Aug 25.

Abstract

HIV-1 transcription is activated by the Tat protein, which recruits CDK9/cyclin T1 to the HIV-1 promoter. CDK9 is phosphorylated by CDK2, which facilitates formation of the high-molecular-weight positive transcription elongation factor b (P-TEFb) complex. We previously showed that chelation of intracellular iron inhibits CDK2 and CDK9 activities and suppresses HIV-1 transcription, but the mechanism of the inhibition was not understood. In the present study, we tested a set of novel iron chelators for the ability to inhibit HIV-1 transcription and elucidated their mechanism of action. Novel phenyl-1-pyridin-2yl-ethanone (PPY)-based iron chelators were synthesized and examined for their effects on cellular iron, HIV-1 inhibition, and cytotoxicity. Activities of CDK2 and CDK9, expression of CDK9-dependent and CDK2-inhibitory mRNAs, NF-κB expression, and HIV-1- and NF-κB-dependent transcription were determined. PPY-based iron chelators significantly inhibited HIV-1, with minimal cytotoxicity, in cultured and primary cells chronically or acutely infected with HIV-1 subtype B, but they had less of an effect on HIV-1 subtype C. Iron chelators upregulated the expression of IκB-α, with increased accumulation of cytoplasmic NF-κB. The iron chelators inhibited CDK2 activity and reduced the amount of CDK9/cyclin T1 in the large P-TEFb complex. Iron chelators reduced HIV-1 Gag and Env mRNA synthesis but had no effect on HIV-1 reverse transcription. In addition, iron chelators moderately inhibited basal HIV-1 transcription, equally affecting HIV-1 and Sp1- or NF-κB-driven transcription. By virtue of their involvement in targeting several key steps in HIV-1 transcription, these novel iron chelators have the potential for the development of new therapeutics for the treatment of HIV-1 infection.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Cell Line
  • Cell Survival
  • Cyclin A / biosynthesis
  • Cyclin A / genetics
  • Cyclin E / biosynthesis
  • Cyclin E / genetics
  • Cyclin T / biosynthesis
  • Cyclin-Dependent Kinase 2 / antagonists & inhibitors
  • Cyclin-Dependent Kinase 2 / metabolism*
  • Cyclin-Dependent Kinase 9 / antagonists & inhibitors
  • Cyclin-Dependent Kinase 9 / metabolism*
  • Cyclin-Dependent Kinase Inhibitor p21 / biosynthesis
  • Cyclin-Dependent Kinase Inhibitor p21 / genetics
  • Gene Expression Regulation, Viral / drug effects
  • HEK293 Cells
  • HIV-1 / drug effects
  • HIV-1 / genetics*
  • Humans
  • I-kappa B Kinase / biosynthesis*
  • I-kappa B Kinase / genetics
  • I-kappa B Kinase / metabolism
  • Iron Chelating Agents / pharmacology*
  • RNA, Messenger / biosynthesis
  • Reverse Transcription / drug effects
  • S Phase Cell Cycle Checkpoints / drug effects
  • Transcription Factor RelA / metabolism
  • Transcription, Genetic / drug effects
  • Virus Replication / drug effects
  • env Gene Products, Human Immunodeficiency Virus / biosynthesis
  • gag Gene Products, Human Immunodeficiency Virus / biosynthesis

Substances

  • CCNT1 protein, human
  • Cyclin A
  • Cyclin E
  • Cyclin T
  • Cyclin-Dependent Kinase Inhibitor p21
  • Iron Chelating Agents
  • RELA protein, human
  • RNA, Messenger
  • Transcription Factor RelA
  • env Gene Products, Human Immunodeficiency Virus
  • gag Gene Products, Human Immunodeficiency Virus
  • I-kappa B Kinase
  • CDK2 protein, human
  • CDK9 protein, human
  • Cyclin-Dependent Kinase 2
  • Cyclin-Dependent Kinase 9