Supervised accelerometry analysis can identify prey capture by penguins at sea

J Exp Biol. 2014 Dec 15;217(Pt 24):4295-302. doi: 10.1242/jeb.113076. Epub 2014 Nov 13.

Abstract

Determining where, when and how much animals eat is fundamental to understanding their ecology. We developed a technique to identify a prey capture signature for little penguins from accelerometry, in order to quantify food intake remotely. We categorised behaviour of captive penguins from HD video and matched this to time-series data from back-mounted accelerometers. We then trained a support vector machine (SVM) to classify the penguins' behaviour at 0.3 s intervals as either 'prey handling' or 'swimming'. We applied this model to accelerometer data collected from foraging wild penguins to identify prey capture events. We compared prey capture and non-prey capture dives to test the model predictions against foraging theory. The SVM had an accuracy of 84.95±0.26% (mean ± s.e.) and a false positive rate of 9.82±0.24% when tested on unseen captive data. For wild data, we defined three independent, consecutive prey handling observations as representing true prey capture, with a false positive rate of 0.09%. Dives with prey captures had longer duration and bottom times, were deeper, had faster ascent rates, and had more 'wiggles' and 'dashes' (proxies for prey encounter used in other studies). The mean (±s.e.) number of prey captures per foraging trip was 446.6±66.28. By recording the behaviour of captive animals on HD video and using a supervised machine learning approach, we show that accelerometry signatures can classify the behaviour of wild animals at unprecedentedly fine scales.

Keywords: Energetics; Eudyptula minor; Feeding; Foraging ecology; Machine learning; Penguin; Predation; Support vector machine.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Accelerometry
  • Animals
  • Diving / physiology
  • Feeding Behavior / physiology*
  • Predatory Behavior / physiology*
  • Spheniscidae / physiology*
  • Swimming / physiology*