Differing evolutionary histories of the ACTN3*R577X polymorphism among the major human geographic groups

PLoS One. 2015 Feb 23;10(2):e0115449. doi: 10.1371/journal.pone.0115449. eCollection 2015.

Abstract

It has been proposed that the functional ACTN3*R577X polymorphism might have evolved due to selection in Eurasian human populations. To test this possibility we surveyed all available population-based data for this polymorphism and performed a comprehensive evolutionary analysis of its genetic diversity, in order to assess the action of adaptive and random mechanisms on its variation across human geographical distribution. The derived 577X allele increases in frequency with distance from Africa, reaching the highest frequencies on the American continent. Positive selection, detected by an extended haplotype homozygosisty test, was consistent only with the Eurasian data, but simulations with neutral models could not fully explain the results found in the American continent. It is possible that particularities of Native American population structure could be responsible for the observed allele frequencies, which would have resulted from a complex interaction between selective and random factors.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinin / genetics*
  • Alleles
  • Evolution, Molecular*
  • Gene Frequency
  • Genetics, Population
  • Genotype
  • Haplotypes
  • Humans
  • Models, Genetic
  • Phenotype
  • Polymorphism, Single Nucleotide*
  • Racial Groups / genetics*

Substances

  • ACTN3 protein, human
  • Actinin

Grants and funding

This research was supported by funding from Programa Núcleos de Excelência (PRONEX 10.0024-6 to FMS), Conselho Nacional de Desenvolvimento Científico e Tecnológico (142216/2009-7 to CEGA; 473118/2012-2 to FMS; 471573/2012-4; 405996/2013-6 to MCB and 480380/2012-0 to TH), Fundação de Amparo à Pesquisa do Estado do Rio Grande do Sul (FAPERGS/PqG 2011–2013 to MCB), Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (BEX 8279-11-0 and BEX 9187-13-8 to CEGA; PNPD 007453/2011-04 to TH).