IDH mutation, 1p19q codeletion and ATRX loss in WHO grade II gliomas

Oncotarget. 2015 Oct 6;6(30):30295-305. doi: 10.18632/oncotarget.4497.

Abstract

Background: Epigenetic, genetic, and molecular studies have identified several diagnostic and prognostic markers in diffuse gliomas. Their importance for evaluating WHO grade II gliomas has yet to be specifically delineated.

Methods: We analyzed markers, including IDH mutation(IDHmut), 1p19q codeletion(1p19qcodel), ATRX expression loss(ATRX loss) and p53 overexpression, and outcomes in 159 patients with WHO grade II oligodendroglioma, oligoastrocytoma, and astrocytoma (2003-2012).

Results: IDHmut was found in 141(91%) and ATRX loss in 64(87%) of IDHmut-noncodel tumors (p = 0.003). All codeleted tumors (n = 66) were IDHmut. Four subgroups were identified: IDHmut-codel, 66(43%); IDHmut-noncodel-ATRX loss, 60(39%); IDHmut-noncodel-ATRXwt, 9(6%); IDHwt, 14(9%). Median survival among 4 groups was significantly different (p = 0.038), particularly in IDHmut-codel (median survival 15.6 years) compared to the remaining 3 groups (p = 0.025). Survival by histology was not significant. Overall (OS), but not progression-free (PFS), survival was significantly longer with gross total resection vs. biopsy only (p = 0.042). Outcomes for patients with subtotal resection were not significantly different from those with biopsy only. Among these uniformly treated patients, OS far exceeds PFS, particularly in those with 1p/19q codeletion.

Conclusions: For WHO grade II diffuse glioma, molecular classification using 1p/19qcodel, IDHmut, and ATRX loss more accurately predicts outcome and should be incorporated in the neuropathologic evaluation.

Keywords: 1p19q codeletion; ATRX; IDH mutation; WHO grade II; diffuse gliomas.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Aged, 80 and over
  • Biomarkers, Tumor / deficiency*
  • Biomarkers, Tumor / genetics*
  • Biopsy
  • Brain Neoplasms / enzymology
  • Brain Neoplasms / genetics*
  • Brain Neoplasms / mortality
  • Brain Neoplasms / pathology
  • Brain Neoplasms / therapy
  • Chromosome Deletion*
  • Chromosomes, Human, Pair 1*
  • DNA Helicases / deficiency*
  • DNA Mutational Analysis
  • Disease Progression
  • Disease-Free Survival
  • Female
  • Genetic Predisposition to Disease
  • Glioma / enzymology
  • Glioma / genetics*
  • Glioma / mortality
  • Glioma / pathology
  • Glioma / therapy
  • Humans
  • Immunohistochemistry
  • Isocitrate Dehydrogenase / genetics*
  • Kaplan-Meier Estimate
  • Male
  • Middle Aged
  • Mutation*
  • Neoplasm Grading
  • Nuclear Proteins / deficiency*
  • Phenotype
  • Registries
  • Retrospective Studies
  • Time Factors
  • Tumor Suppressor Protein p53 / analysis
  • X-linked Nuclear Protein
  • Young Adult

Substances

  • Biomarkers, Tumor
  • Nuclear Proteins
  • TP53 protein, human
  • Tumor Suppressor Protein p53
  • Isocitrate Dehydrogenase
  • DNA Helicases
  • ATRX protein, human
  • X-linked Nuclear Protein