A genome-scale screen reveals context-dependent ovarian cancer sensitivity to miRNA overexpression

Mol Syst Biol. 2015 Dec 11;11(12):842. doi: 10.15252/msb.20156308.

Abstract

Large-scale molecular annotation of epithelial ovarian cancer (EOC) indicates remarkable heterogeneity in the etiology of that disease. This diversity presents a significant obstacle against intervention target discovery. However, inactivation of miRNA biogenesis is commonly associated with advanced disease. Thus, restoration of miRNA activity may represent a common vulnerability among diverse EOC oncogenotypes. To test this, we employed genome-scale, gain-of-function, miRNA mimic toxicity screens in a large, diverse spectrum of EOC cell lines. We found that all cell lines responded to at least some miRNA mimics, but that the nature of the miRNA mimics provoking a response was highly selective within the panel. These selective toxicity profiles were leveraged to define modes of action and molecular response indicators for miRNA mimics with tumor-suppressive characteristics in vivo. A mechanistic principle emerging from this analysis was sensitivity of EOC to miRNA-mediated release of cell fate specification programs, loss of which may be a prerequisite for development of this disease.

Keywords: cancer; cancer genetics; miRNA; microRNA; ovarian cancer.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Biomimetic Materials / administration & dosage*
  • Biomimetic Materials / pharmacology
  • Carcinoma, Ovarian Epithelial
  • Cell Differentiation / drug effects
  • Cell Line, Tumor
  • Cell Proliferation / drug effects
  • Cell Survival / drug effects
  • Down-Regulation
  • Female
  • Gene Expression Regulation, Neoplastic / drug effects
  • Genome-Wide Association Study
  • Humans
  • Mice
  • MicroRNAs / genetics*
  • Neoplasms, Glandular and Epithelial / drug therapy*
  • Neoplasms, Glandular and Epithelial / genetics*
  • Ovarian Neoplasms / drug therapy*
  • Ovarian Neoplasms / genetics*
  • Xenograft Model Antitumor Assays

Substances

  • MicroRNAs

Associated data

  • GEO/GSE67330
  • SRA/SRP065357