Electrical detection of dengue virus (DENV) DNA oligomer using silicon nanowire biosensor with novel molecular gate control

Biosens Bioelectron. 2016 Sep 15:83:106-14. doi: 10.1016/j.bios.2016.04.033. Epub 2016 Apr 14.

Abstract

In this paper, a silicon nanowire biosensor with novel molecular gate control has been demonstrated for Deoxyribonucleic acid (DNA) detection related to dengue virus (DENV). The silicon nanowire was fabricated using the top-down nanolithography approach, through nanostructuring of silicon-on-insulator (SOI) layers achieved by combination of the electron-beam lithography (EBL), plasma dry etching and size reduction processes. The surface of the fabricated silicon nanowire was functionalized by means of a three-step procedure involving surface modification, DNA immobilization and hybridization. This procedure acts as a molecular gate control to establish the electrical detection for 27-mers base targets DENV DNA oligomer. The electrical detection is based on the changes in current, resistance and conductance of the sensor due to accumulation of negative charges added by the immobilized probe DNA and hybridized target DNA. The sensitivity of the silicon nanowire biosensors attained was 45.0µAM(-1), which shows a wide-range detection capability of the sensor with respect to DNA. The limit of detection (LOD) achieved was approximately 2.0fM. The demonstrated results show that the silicon nanowire has excellent properties for detection of DENV with outstanding repeatability and reproducibility performances.

Keywords: Dengue fever (DF); Deoxyribonucleic acid (DNA); Electrical detection; Molecular gate control; Nanolithography; Silicon nanowire biosensor.

Publication types

  • Evaluation Study

MeSH terms

  • Biosensing Techniques / instrumentation*
  • DNA, Viral / analysis*
  • Dengue / diagnosis
  • Dengue / virology
  • Dengue Virus / isolation & purification*
  • Equipment Design
  • Humans
  • Immobilized Nucleic Acids / chemistry*
  • Lab-On-A-Chip Devices
  • Limit of Detection
  • Nanowires / chemistry*
  • Nanowires / ultrastructure
  • Reproducibility of Results
  • Silicon / chemistry*
  • Transducers

Substances

  • DNA, Viral
  • Immobilized Nucleic Acids
  • Silicon