Differentiated analysis of the secondary structure of hydrophilic and hydrophobic regions in alpha- and beta-subunits of Na+,K+-ATPase by Raman spectroscopy

FEBS Lett. 1988 Jan 25;227(2):235-9. doi: 10.1016/0014-5793(88)80905-0.

Abstract

Raman spectra of active Na+,K+-ATPase from pig kidney and membrane-bound products of its two-stage trypsinolysis, including alpha-subunit hydrophobic regions as well as the intact beta-subunit and hydrophobic regions of alpha- and beta-subunits, were measured to calculate the secondary structure of hydrophilic and hydrophobic regions of the enzyme. Consequent comparison demonstrated unambiguously that (i) membrane-bound hydrophobic parts of polypeptide chains of Na+,K+-ATPase subunits are in the alpha-helical conformation; (ii) essential contents of the alpha-helix as well as beta-sheet are estimated to form the hydrophilic (mainly cytoplasmic) domain of the Na+,K+-ATPase alpha-subunit; (iii) the exoplasmic hydrophilic domain of the beta-subunit is shown to include several antiparallel beta-pleated sheets and a small amount of the alpha-helix and unordered conformations. The model of the secondary structure organization of hydrophilic domains as well as 8 hydrophobic transmembrane segments of the enzyme molecule was proposed on the basis of experimental results and predictional calculations.

MeSH terms

  • Animals
  • Cell Membrane / enzymology
  • Kidney Medulla / enzymology
  • Macromolecular Substances
  • Models, Molecular
  • Protein Conformation
  • Sodium-Potassium-Exchanging ATPase*
  • Spectrum Analysis, Raman / methods
  • Swine
  • Trypsin

Substances

  • Macromolecular Substances
  • Trypsin
  • Sodium-Potassium-Exchanging ATPase