Structural and stereoelectronic insights into oxygenase-catalyzed formation of ethylene from 2-oxoglutarate

Proc Natl Acad Sci U S A. 2017 May 2;114(18):4667-4672. doi: 10.1073/pnas.1617760114. Epub 2017 Apr 18.

Abstract

Ethylene is important in industry and biological signaling. In plants, ethylene is produced by oxidation of 1-aminocyclopropane-1-carboxylic acid, as catalyzed by 1-aminocyclopropane-1-carboxylic acid oxidase. Bacteria catalyze ethylene production, but via the four-electron oxidation of 2-oxoglutarate to give ethylene in an arginine-dependent reaction. Crystallographic and biochemical studies on the Pseudomonas syringae ethylene-forming enzyme reveal a branched mechanism. In one branch, an apparently typical 2-oxoglutarate oxygenase reaction to give succinate, carbon dioxide, and sometimes pyrroline-5-carboxylate occurs. Alternatively, Grob-type oxidative fragmentation of a 2-oxoglutarate-derived intermediate occurs to give ethylene and carbon dioxide. Crystallographic and quantum chemical studies reveal that fragmentation to give ethylene is promoted by binding of l-arginine in a nonoxidized conformation and of 2-oxoglutarate in an unprecedented high-energy conformation that favors ethylene, relative to succinate formation.

Keywords: 2-oxoglutarate-dependent oxygenases; ethylene-forming enzyme; hydroxylase; oxidoreductase; plant development.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism
  • Catalysis
  • Crystallography, X-Ray
  • Ethylenes / chemistry*
  • Ethylenes / metabolism
  • Ketoglutaric Acids / chemistry*
  • Ketoglutaric Acids / metabolism
  • Lyases / chemistry*
  • Lyases / metabolism
  • Models, Chemical*
  • Pseudomonas syringae / enzymology*

Substances

  • Bacterial Proteins
  • Ethylenes
  • Ketoglutaric Acids
  • ethylene
  • Lyases
  • ethylene forming enzyme