Extraction of cell-free DNA from urine, using polylysine-coated silica particles

Anal Bioanal Chem. 2017 Jun;409(16):4021-4025. doi: 10.1007/s00216-017-0345-3. Epub 2017 Apr 19.

Abstract

DNA analysis is used for a variety of purposes, including disease diagnosis and DNA profiling; this involves extracting DNA from living organisms. In this study, we prepared polycationic silica particles to extract DNA that has the negatively charged phosphate backbone from solution. The coated particles were prepared by mixing conventional silica gel particles and poly-Lys; these particles could efficiently extract 1.3 μg of cell-free DNA from 50 mL of (male) urine. It is expected that these easily prepared particles (just a mixture of two commercially available chemicals) can be used as a noninvasive diagnostic tool for genetic disorders such as cancer, diabetes, and hypertension. Graphical abstract Effective extraction method of cfDNA from urine was developed that used commercially available silica gel particles and poly-Lys.

Keywords: Cell-free DNA; Poly-Lys; Silica particle; Urine.

MeSH terms

  • Cell-Free Nucleic Acids / isolation & purification
  • Cell-Free Nucleic Acids / urine*
  • DNA / isolation & purification
  • DNA / urine*
  • Electrophoresis, Agar Gel / methods
  • Humans
  • Particle Size
  • Polylysine / chemistry*
  • Silicon Dioxide / chemistry*
  • Solid Phase Extraction / methods*

Substances

  • Cell-Free Nucleic Acids
  • Polylysine
  • Silicon Dioxide
  • DNA