An in silico model of cytotoxic T-lymphocyte activation in the lymph node following short peptide vaccination

J R Soc Interface. 2018 Mar;15(140):20180041. doi: 10.1098/rsif.2018.0041.

Abstract

Tumour immunotherapy is dependent upon activation and expansion of tumour-targetting immune cells, known as cytotoxic T-lymphocytes (CTLs). Cancer vaccines developed in the past have had limited success and the mechanisms resulting in failure are not well characterized. To elucidate these mechanisms, we developed a human-parametrized, in silico, agent-based model of vaccination-driven CTL activation within a clinical short-peptide vaccination context. The simulations predict a sharp transition in the probability of CTL activation, which occurs with variation in the separation rate (or off-rate) of tumour-specific immune response-inducing peptides (cognate antigen) from the major histocompatibility class I (MHC-I) receptors of dendritic cells (DCs) originally at the vaccination site. For peptides with MHC-I off-rates beyond this transition, it is predicted that no vaccination strategy will lead to successful expansion of CTLs. For slower off-rates, below the transition, the probability of CTL activation becomes sensitive to the numbers of DCs and T cells that interact subsequent to DC migration to the draining lymph node of the vaccination site. Thus, the off-rate is a key determinant of vaccine design.

Keywords: T-cell dynamics; antigen presentation; cancer vaccine; cytotoxic T-Lymphocyte activation; lymph node; modelling and simulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antigen Presentation
  • Antigens, Neoplasm / immunology*
  • Cancer Vaccines / immunology*
  • Computer Simulation*
  • Dendritic Cells / immunology
  • Dendritic Cells / pathology
  • Histocompatibility Antigens Class I / immunology
  • Humans
  • Lymph Nodes / immunology*
  • Lymph Nodes / pathology
  • Models, Immunological*
  • Peptides / immunology*
  • T-Lymphocytes, Cytotoxic / immunology*
  • T-Lymphocytes, Cytotoxic / pathology

Substances

  • Antigens, Neoplasm
  • Cancer Vaccines
  • Histocompatibility Antigens Class I
  • Peptides