Analysis of GWAS-linked variants in multiple system atrophy

Neurobiol Aging. 2018 Jul:67:201.e1-201.e4. doi: 10.1016/j.neurobiolaging.2018.03.018. Epub 2018 Mar 23.

Abstract

A recent genome-wide association study performed in European population identified 4 potentially interesting gene loci of multiple system atrophy (MSA), including the EDN1 rs16872704, MAPT rs9303521, FBXO47 rs78523330, and ELOVL7 rs7715147. Because of the genetic heterogeneity, we aimed to explore the possible genetic association between above 4 single nucleotide polymorphisms (SNPs) and MSA in Chinese Han population from Mainland China, Taiwan, and Singapore. A total of 1847 subjects comprising 906 MSA patients and 941 unrelated healthy controls were genotyped by directly sequencing for these SNPs. No significant differences in the genotype distributions, minor allele frequency of EDN1 rs16872704, MAPT rs9303521, FBXO47 rs78523330, and ELOVL7 rs7715147 between MSA patients and healthy controls, and between subtypes of MSA patients (MSA-C and MSA-P), were found. In conclusion, we demonstrated that genome-wide association study-linked SNPs in Caucasians do not confer a significant risk for MSA in the Chinese population.

Keywords: Association; Multiple system atrophy; Single nucleotide polymorphism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetyltransferases / genetics
  • Adult
  • Aged
  • Asian People / genetics
  • Endothelin-1 / genetics*
  • Fatty Acid Elongases
  • Female
  • Genome-Wide Association Study*
  • Genotype
  • Humans
  • Male
  • Middle Aged
  • Multiple System Atrophy / genetics*
  • Polymorphism, Single Nucleotide / genetics*
  • Transcription Factors / genetics
  • White People / genetics
  • tau Proteins / genetics*

Substances

  • ELOVL7 protein, human
  • Endothelin-1
  • FBXO47 protein, human
  • MAPT protein, human
  • Transcription Factors
  • tau Proteins
  • Acetyltransferases
  • Fatty Acid Elongases