Single-Molecule Force Measurement Guides the Design of Multivalent Ligands with Picomolar Affinity

Angew Chem Int Ed Engl. 2019 Apr 8;58(16):5272-5276. doi: 10.1002/anie.201814347. Epub 2019 Feb 18.

Abstract

Interaction of multiple entities and receptors, or multivalency is widely applied to achieve high affinity ligands for diagnostic and therapeutic purposes. However, lack of knowledge on receptor distribution in living subjects remains a challenge for rational structure design. Herein, we develop a force measurement platform to probe the distribution and separation of the cell surface vascular endothelial growth factor receptors (VEGFR) in live cells, and use this to assess the geometry of appropriate linkers for distinct multivalent binding modes. A tetravalent lead ZD-4, which was developed from an antitumor drug ZD6474 (Vandetanib) with combined hybrid binding effects, yielded a 2000-fold improvement in the binding affinity to VEGFR with IC50 value of 25 pm. We confirmed the improved affinity by the associated increase of tumor uptake in the VEGFR-targeting positron emission tomography (PET) imaging using U87 tumor xenograft mouse model.

Keywords: PET imaging; atomic force microscopy; ligand design; multivalency; tumor targeting.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antineoplastic Agents / analysis*
  • Antineoplastic Agents / pharmacology
  • Binding Sites / drug effects
  • Cell Line, Tumor
  • Humans
  • Ligands
  • Mice
  • Molecular Structure
  • Neoplasms, Experimental / diagnostic imaging
  • Neoplasms, Experimental / drug therapy
  • Neoplasms, Experimental / metabolism
  • Optical Imaging
  • Piperidines / analysis*
  • Piperidines / pharmacology
  • Positron-Emission Tomography
  • Protein Kinase Inhibitors / analysis*
  • Protein Kinase Inhibitors / pharmacology
  • Quinazolines / analysis*
  • Quinazolines / pharmacology
  • Receptors, Vascular Endothelial Growth Factor / antagonists & inhibitors
  • Receptors, Vascular Endothelial Growth Factor / metabolism

Substances

  • Antineoplastic Agents
  • Ligands
  • Piperidines
  • Protein Kinase Inhibitors
  • Quinazolines
  • Receptors, Vascular Endothelial Growth Factor
  • vandetanib