Genetic Variants Associated With Immunosuppressant Pharmacokinetics and Adverse Effects in the DeKAF Genomics Genome-wide Association Studies

Transplantation. 2019 Jun;103(6):1131-1139. doi: 10.1097/TP.0000000000002625.

Abstract

Background: The immunosuppressants tacrolimus and mycophenolate are important components to the success of organ transplantation, but are also associated with adverse effects, such as nephrotoxicity, anemia, leukopenia, and new-onset diabetes after transplantation. In this report, we attempted to identify genetic variants which are associated with these adverse outcomes.

Methods: We performed a genome-wide association study, using a genotyping array tailored specifically for transplantation outcomes containing 722 147 single nucleotide polymorphisms, and 2 cohorts of kidney allograft recipients-a discovery cohort and a confirmation cohort-to identify and then confirm genetic variants associated with immunosuppressant pharmacokinetics and adverse outcomes.

Results: Several genetic variants were found to be associated with tacrolimus trough concentrations. We did not confirm variants associated with the other phenotypes tested although several suggestive variants were identified.

Conclusions: These results show that adverse effects associated with tacrolimus and mycophenolate are complex, and recipient risk is not determined by a few genetic variants with large effects with but most likely are due to many variants, each with small effect sizes, and clinical factors.

Publication types

  • Multicenter Study
  • Observational Study
  • Research Support, American Recovery and Reinvestment Act
  • Research Support, N.I.H., Extramural

MeSH terms

  • Adult
  • Aged
  • Anemia / chemically induced
  • Anemia / genetics
  • Diabetes Mellitus / chemically induced
  • Diabetes Mellitus / genetics
  • Female
  • Genome-Wide Association Study
  • Genotype
  • Graft Rejection / immunology
  • Graft Rejection / prevention & control
  • Graft Survival / drug effects
  • Humans
  • Immunosuppressive Agents / administration & dosage
  • Immunosuppressive Agents / adverse effects*
  • Immunosuppressive Agents / pharmacokinetics*
  • Kidney Diseases / chemically induced
  • Kidney Diseases / genetics
  • Kidney Transplantation* / adverse effects
  • Leukopenia / chemically induced
  • Leukopenia / genetics
  • Male
  • Middle Aged
  • Mycophenolic Acid / administration & dosage
  • Mycophenolic Acid / adverse effects*
  • Mycophenolic Acid / pharmacokinetics*
  • Pharmacogenomic Variants*
  • Polymorphism, Single Nucleotide*
  • Risk Assessment
  • Risk Factors
  • Tacrolimus / administration & dosage
  • Tacrolimus / adverse effects*
  • Tacrolimus / pharmacokinetics*
  • United States
  • Young Adult

Substances

  • Immunosuppressive Agents
  • Mycophenolic Acid
  • Tacrolimus