Disrupted apolipoprotein L1-miR193a axis dedifferentiates podocytes through autophagy blockade in an APOL1 risk milieu

Am J Physiol Cell Physiol. 2019 Aug 1;317(2):C209-C225. doi: 10.1152/ajpcell.00538.2018. Epub 2019 May 22.

Abstract

We hypothesized that a functional apolipoprotein LI (APOL1)-miR193a axis (inverse relationship) preserves, but disruption alters, the podocyte molecular phenotype through the modulation of autophagy flux. Podocyte-expressing APOL1G0 (G0-podocytes) showed downregulation but podocyte-expressing APOL1G1 (G1-podocytes) and APOL1G2 (G2-podocytes) displayed enhanced miR193a expression. G0-, G1-, and G2-podocytes showed enhanced expression of light chain (LC) 3-II and beclin-1, but a disparate expression of p62 (low in wild-type but high in risk alleles). G0-podocytes showed enhanced, whereas G1- and G2-podocytes displayed decreased, phosphorylation of Unc-51-like autophagy-activating kinase (ULK)1 and class III phosphatidylinositol 3-kinase (PI3KC3). Podocytes overexpressing miR193a (miR193a-podocytes), G1, and G2 showed decreased transcription of PIK3R3 (PI3KC3's regulatory unit). Since 3-methyladenine (3-MA) enhanced miR193a expression but inhibited PIK3R3 transcription, it appears that 3-MA inhibits autophagy and induces podocyte dedifferentiation via miR193a generation. miR193a-, G1-, and G2-podocytes also showed decreased phosphorylation of mammalian target of rapamycin (mTOR) that could repress lysosome reformation. G1- and G2-podocytes showed enhanced expression of run domain beclin-1-interacting and cysteine-rich domain-containing protein (Rubicon); however, its silencing prevented their dedifferentiation. Docking, protein-protein interaction, and immunoprecipitation studies with antiautophagy-related gene (ATG)14L, anti-UV radiation resistance-associated gene (UVRAG), or Rubicon antibodies suggested the formation of ATG14L complex I and UVRAG complex II in G0-podocytes and the formation of Rubicon complex III in G1- and G2-podocytes. These findings suggest that the APOL1 risk alleles favor podocyte dedifferentiation through blockade of multiple autophagy pathways.

Keywords: APOL1; autophagy; dedifferentiation of podocytes; miR193a; podocytes.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Vesicular Transport / metabolism
  • Apolipoprotein L1 / genetics
  • Apolipoprotein L1 / metabolism*
  • Autophagosomes / metabolism
  • Autophagosomes / pathology
  • Autophagy*
  • Autophagy-Related Proteins / metabolism
  • Cell Dedifferentiation*
  • Cell Line, Transformed
  • Gene Expression Regulation
  • Humans
  • MicroRNAs / genetics
  • MicroRNAs / metabolism*
  • Molecular Dynamics Simulation
  • Phenotype
  • Phosphatidylinositol 3-Kinases / metabolism
  • Podocytes / metabolism*
  • Podocytes / pathology
  • Protein Interaction Maps
  • Signal Transduction
  • Tumor Suppressor Proteins / metabolism

Substances

  • APOL1 protein, human
  • ATG14 protein, human
  • Adaptor Proteins, Vesicular Transport
  • Apolipoprotein L1
  • Autophagy-Related Proteins
  • MIRN193 microRNA, human
  • MicroRNAs
  • RUBCN protein, human
  • Tumor Suppressor Proteins
  • UVRAG protein, human
  • PIK3R3 protein, human