Resolving human DNA mixtures with F-108 polymer and capillary electrophoresis single-strand conformational polymorphism analysis

J Sep Sci. 2020 Aug;43(16):3327-3332. doi: 10.1002/jssc.202000194. Epub 2020 Jul 2.

Abstract

Current technologies have increased the sensitivity for analyzing forensic DNA samples, especially those considered "touch samples." Because of this, there has been an increase in the number of forensic mixtures-two or more contributors within a single sample-submitted to the crime laboratories. Therefore, the need to resolve these mixtures has increased as well. Several technologies are currently utilized, but many of them are time consuming and do not resolve the entire profile. Therefore, CE-Single-Strand Conformational Polymorphisms coupled with the Pluronic F-108 polymer was assessed for its ability to resolve human forensic mixtures. This technique has been able to detect sequence variation, such as single nucleotide polymorphism in short tandem repeat loci, such as D7S820 and vWA. Samples were first analyzed with the Performance Optimized Polymer-7, and mixtures created from samples that shared alleles. These samples were sequenced to detect single base-pair mutations and evaluated with the F-108 and CE-Single Strand Conformational Polymorphism analysis. Results from this study indicated the method would serve as a valuable screening tool to detect base sequence variation between individuals when they share alleles in a mixture and before using Massive Parallel Sequencing technology to distinguish which bases differ.

Keywords: F-108 polymer; forensic mixtures; short tandem repeats; single strand conformational polymorphisms.

MeSH terms

  • DNA / genetics*
  • Electrophoresis, Capillary
  • Female
  • Forensic Genetics
  • Humans
  • Male
  • Polymerase Chain Reaction
  • Polymers / chemistry*
  • Polymorphism, Single-Stranded Conformational / genetics*

Substances

  • Polymers
  • DNA