Volumetric GWAS of medial temporal lobe structures identifies an ERC1 locus using ADNI high-resolution T2-weighted MRI data

Neurobiol Aging. 2020 Nov:95:81-93. doi: 10.1016/j.neurobiolaging.2020.07.005. Epub 2020 Jul 14.

Abstract

Medial temporal lobe (MTL) consists of hippocampal subfields and neighboring cortices. These heterogeneous structures are differentially involved in memory, cognitive and emotional functions, and present nonuniformly distributed atrophy contributing to cognitive disorders. This study aims to examine how genetics influences Alzheimer's disease (AD) pathogenesis via MTL substructures by analyzing high-resolution magnetic resonance imaging (MRI) data. We performed genome-wide association study to examine the associations between 565,373 single nucleotide polymorphisms (SNPs) and 14 MTL substructure volumes. A novel association with right Brodmann area 36 volume was discovered in an ERC1 SNP (i.e., rs2968869). Further analyses on larger samples found rs2968869 to be associated with gray matter density and glucose metabolism measures in the right hippocampus, and disease status. Tissue-specific transcriptomic analysis identified the minor allele of rs2968869 (rs2968869-C) to be associated with reduced ERC1 expression in the hippocampus. All the findings indicated a protective role of rs2968869-C in AD. We demonstrated the power of high-resolution MRI and the promise of fine-grained MTL substructures for revealing the genetic basis of AD biomarkers.

Keywords: Alzheimer’s disease; BA36; ERC1; Genome-wide association study (GWAS); High-resolution T2-weighted MRI; Medial temporal lobe.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Adaptor Proteins, Signal Transducing / genetics*
  • Adaptor Proteins, Signal Transducing / metabolism
  • Alleles
  • Alzheimer Disease / diagnostic imaging
  • Alzheimer Disease / genetics*
  • Alzheimer Disease / pathology*
  • Alzheimer Disease / psychology
  • Diffusion Magnetic Resonance Imaging / methods*
  • Gene Expression
  • Genetic Loci / genetics*
  • Genome-Wide Association Study / methods*
  • Humans
  • Image Enhancement / methods*
  • Nerve Tissue Proteins / genetics*
  • Nerve Tissue Proteins / metabolism
  • Organ Size
  • Polymorphism, Single Nucleotide
  • Temporal Lobe / diagnostic imaging*
  • Temporal Lobe / metabolism
  • Temporal Lobe / pathology*
  • Transcriptome / genetics

Substances

  • Adaptor Proteins, Signal Transducing
  • ERC1 protein, human
  • Nerve Tissue Proteins