Vibrio tetraodonis sp. nov.: genomic insights on the secondary metabolites repertoire

Arch Microbiol. 2021 Jan;203(1):399-404. doi: 10.1007/s00203-020-02019-2. Epub 2020 Aug 25.

Abstract

Description of a Gram-negative, motile, circular-shaped bacterial strain, designated A511T obtained from the skin of the pufferfish Sphoeroides spengleri (Family Tetraodontidae), collected in Arraial do Cabo, Brazil. Optimum growth occurs at 20-28 °C in the presence of 3% NaCl. The genome sequence of the novel isolate consisted of 4.36 Mb, 3,976 coding genes and G + C content of 42.5%. Genomic taxonomy analyses based on average amino acid (AAI), genome-to-genome-distance (GGDH) and phylogenetic reconstruction placed A511T (= CBAS 712T = CAIM 1939T) into a new species of the genus Vibrio (Vibrio tetraodonis sp. nov.). The genome of the novel species contains eight genes clusters (~ 183.9 Kbp in total) coding for different types of bioactive compounds that hint to several possible ecological roles in the pufferfish host.

Keywords: Genomic taxonomy; New species; Tetradontidae; Vibrio.

MeSH terms

  • Base Composition
  • Brazil
  • Genome, Bacterial / genetics*
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Sodium Chloride / metabolism
  • Species Specificity
  • Vibrio / classification*
  • Vibrio / genetics*
  • Vibrio / growth & development
  • Vibrio / metabolism

Substances

  • RNA, Ribosomal, 16S
  • Sodium Chloride