Digital Pathology Platform for Respiratory Tract Infection Diagnosis via Multiplex Single-Particle Detections

ACS Sens. 2020 Nov 25;5(11):3398-3403. doi: 10.1021/acssensors.0c01564. Epub 2020 Sep 25.

Abstract

The variability of bioparticles remains a key barrier to realizing the competent potential of nanoscale detection into a digital diagnosis of an extraneous object that causes an infectious disease. Here, we report label-free virus identification based on machine-learning classification. Single virus particles were detected using nanopores, and resistive-pulse waveforms were analyzed multilaterally using artificial intelligence. In the discrimination, over 99% accuracy for five different virus species was demonstrated. This advance is accessed through the classification of virus-derived ionic current signal patterns reflecting their intrinsic physical properties in a high-dimensional feature space. Moreover, consideration of viral similarity based on the accuracies indicates the contributing factors in the recognitions. The present findings offer the prospect of a novel surveillance system applicable to detection of multiple viruses including new strains.

Keywords: ionic current; machine learning; solid-state nanopore; virus; virus identification.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Artificial Intelligence
  • Humans
  • Ion Transport
  • Nanopores*
  • Respiratory Tract Infections* / diagnosis
  • Virion