Plasma cytokines for predicting diabetic retinopathy among type 2 diabetic patients via machine learning algorithms

Aging (Albany NY). 2020 Dec 11;13(2):1972-1988. doi: 10.18632/aging.202168. Epub 2020 Dec 11.

Abstract

Aims: This study aimed to investigate changes of plasma cytokines and to develop machine learning classifiers for predicting non-proliferative diabetic retinopathy among type 2 diabetes mellitus patients.

Results: There were 12 plasma cytokines significantly higher in the non-proliferative diabetic retinopathy group in the pilot cohort. The validation cohort showed that angiopoietin 1, platelet-derived growth factor-BB, tissue inhibitors of metalloproteinase 2 and vascular endothelial growth factor receptor 2 were significantly higher in the NPDR group. Machine learning algorithms using the random forest yielded the best performance, with sensitivity of 92.3%, specificity of 75%, PPV of 82.8%, NPV of 88.2% and area under the curve of 0.84.

Conclusions: Plasma angiopoietin 1, platelet-derived growth factor-BB, and vascular endothelial growth factor receptor 2 were associated with presence of non-proliferative diabetic retinopathy and may be good biomarkers that play important roles in pathophysiology of diabetic retinopathy.

Materials and methods: In pilot cohort, 60 plasma cytokines were simultaneously measured. In validation cohort, angiopoietin 1, CXC-chemokine ligand 16, platelet-derived growth factor-BB, tissue inhibitors of metalloproteinase 1, tissue inhibitors of metalloproteinase 2, and vascular endothelial growth factor receptor 2 were validated using ELISA kits. Machine learning algorithms were developed to build a prediction model for non-proliferative diabetic retinopathy.

Keywords: diabetic retinopathy; machine learning algorithms; plasma cytokines; prediction model; type 2 diabetes mellitus.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Algorithms
  • Area Under Curve
  • Biomarkers / blood
  • Cohort Studies
  • Cytokines / blood*
  • Diabetes Mellitus, Type 2 / blood*
  • Diabetes Mellitus, Type 2 / diagnosis*
  • Diabetic Retinopathy / blood*
  • Diabetic Retinopathy / diagnosis*
  • Female
  • Humans
  • Machine Learning
  • Male
  • Middle Aged
  • Pilot Projects
  • Predictive Value of Tests
  • Reproducibility of Results
  • Sensitivity and Specificity

Substances

  • Biomarkers
  • Cytokines