Selection and characterization of structure-switching DNA aptamers for the salivary peptide histatin 3

J Biotechnol. 2021 Feb 10:327:9-17. doi: 10.1016/j.jbiotec.2020.12.018. Epub 2020 Dec 30.

Abstract

In this study, single-stranded DNA aptamers that switch structural conformation upon binding to the salivary peptide histatin 3 have been reported for the first time. Histatin 3 is an antimicrobial peptide that possesses the capability of being a therapeutic agent against oral candidiasis and has recently been linked as a novel biomarker for acute stress. The aptamers were identified through a library immobilization version of an iterative in vitro process known as the Systematic Evolution of Ligands by EXponential enrichment (SELEX). Through the SELEX process, four unique aptamer candidates sharing a consensus sequence were identified. These selected sequences exhibited binding affinity and specificity to histatin 3 and in order to further characterize these aptamers, a direct format enzyme-linked aptamer sorbent assay (ELASA) was developed. The best performing candidate demonstrated an equilibrium dissociation constant (Kd) value of 1.97 ± 0.48 μM. These novel aptamers have the potential to lead to the further development of refined sensing assays and platforms for the detection and quantification of histatin 3 in human saliva and other biological media.

Keywords: Aptamer; ELASA; Histatin 3; SELEX; Saliva; Stress.

MeSH terms

  • Aptamers, Nucleotide*
  • DNA, Single-Stranded / genetics
  • Gene Library
  • Histatins*
  • Humans
  • SELEX Aptamer Technique

Substances

  • Aptamers, Nucleotide
  • DNA, Single-Stranded
  • Histatins