Pleiotropic genetic architecture and novel loci for C-reactive protein levels

Nat Commun. 2022 Nov 14;13(1):6939. doi: 10.1038/s41467-022-34688-6.

Abstract

C-reactive protein is involved in a plethora of pathophysiological conditions. Many genetic loci associated with C-reactive protein are annotated to lipid and glucose metabolism genes supporting common biological pathways between inflammation and metabolic traits. To identify novel pleiotropic loci, we perform multi-trait analysis of genome-wide association studies on C-reactive protein levels along with cardiometabolic traits, followed by a series of in silico analyses including colocalization, phenome-wide association studies and Mendelian randomization. We find 41 novel loci and 19 gene sets associated with C-reactive protein with various pleiotropic effects. Additionally, 41 variants colocalize between C-reactive protein and cardiometabolic risk factors and 12 of them display unexpected discordant effects between the shared traits which are translated into discordant associations with clinical outcomes in subsequent phenome-wide association studies. Our findings provide insights into shared mechanisms underlying inflammation and lipid metabolism, representing potential preventive and therapeutic targets.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • C-Reactive Protein* / genetics
  • Genetic Loci
  • Genetic Pleiotropy
  • Genetic Predisposition to Disease
  • Genome-Wide Association Study*
  • Humans
  • Inflammation / genetics
  • Mendelian Randomization Analysis
  • Polymorphism, Single Nucleotide

Substances

  • C-Reactive Protein