Revisiting regulatory coherence: accounting for temporal bias in plant gene co-expression analyses

Haoran Cai; David L Des Marais

doi:10.1111/nph.18720

Revisiting regulatory coherence: accounting for temporal bias in plant gene co-expression analyses

New Phytol. 2023 Apr;238(1):16-24. doi: 10.1111/nph.18720. Epub 2023 Jan 27.

Authors

Haoran Cai¹, David L Des Marais¹

Affiliation

¹ Department of Civil and Environmental Engineering, MIT, 15 Vassar St., Cambridge, MA, 02139, USA.

PMID: 36617750
DOI: 10.1111/nph.18720

No abstract available

Keywords: Oryza sativa; wgcna; co-expression network; dynamic correlation; gene regulation; regulatory decoherence; stress response; temporal bias.

Publication types

Letter
Research Support, Non-U.S. Gov't

MeSH terms

Gene Expression Profiling
Gene Expression Regulation, Plant
Gene Regulatory Networks
Genes, Plant*
Oryza* / genetics
Plant Proteins / genetics

Substances

Plant Proteins