A Novel mechanism of herbicide action through disruption of pyrimidine biosynthesis

Proc Natl Acad Sci U S A. 2023 Nov 28;120(48):e2313197120. doi: 10.1073/pnas.2313197120. Epub 2023 Nov 21.

Abstract

A lead aryl pyrrolidinone anilide identified using high-throughput in vivo screening was optimized for efficacy, crop safety, and weed spectrum, resulting in tetflupyrolimet. Known modes of action were ruled out through in vitro enzyme and in vivo plant-based assays. Genomic sequencing of aryl pyrrolidinone anilide-resistant Arabidopsis thaliana progeny combined with nutrient reversal experiments and metabolomic analyses confirmed that the molecular target of the chemistry was dihydroorotate dehydrogenase (DHODH), the enzyme that catalyzes the fourth step in the de novo pyrimidine biosynthesis pathway. In vitro enzymatic and biophysical assays and a cocrystal structure with purified recombinant plant DHODH further confirmed this enzyme as the target site of this class of chemistry. Like known inhibitors of other DHODH orthologs, these molecules occupy the membrane-adjacent binding site of the electron acceptor ubiquinone. Identification of a new herbicidal chemical scaffold paired with a novel mode of action, the first such finding in over three decades, represents an important leap in combatting weed resistance and feeding a growing worldwide population.

Keywords: Novel herbicide action; dihydroorotate dehydrogenase; pyrimidine biosynthesis; tetflupyrolimet.

MeSH terms

  • Anilides
  • Dihydroorotate Dehydrogenase
  • Enzyme Inhibitors / pharmacology
  • Herbicides* / pharmacology
  • Oxidoreductases Acting on CH-CH Group Donors* / metabolism
  • Pyrimidines / pharmacology
  • Pyrrolidinones

Substances

  • Dihydroorotate Dehydrogenase
  • Oxidoreductases Acting on CH-CH Group Donors
  • Herbicides
  • Pyrimidines
  • Anilides
  • Pyrrolidinones
  • Enzyme Inhibitors