Isolation and Characterization of a Lytic Bacteriophage RH-42-1 of Erwinia amylovora from Orchard Soil in China

Viruses. 2024 Mar 26;16(4):509. doi: 10.3390/v16040509.

Abstract

Fire blight, caused by the bacterium Erwinia amylovora, is a major threat to pear production worldwide. Bacteriophages, viruses that infect bacteria, are a promising alternative to antibiotics for controlling fire blight. In this study, we isolated a novel bacteriophage, RH-42-1, from Xinjiang, China. We characterized its biological properties, including host range, plaque morphology, infection dynamics, stability, and sensitivity to various chemicals. RH-42-1 infected several E. amylovora strains but not all. It produced clear, uniform plaques and exhibited optimal infectivity at a multiplicity of infection (MOI) of 1, reaching a high titer of 9.6 × 109 plaque-forming units (PFU)/mL. The bacteriophage had a short latent period (10 min), a burst size of 207 PFU/cell, and followed a sigmoidal one-step growth curve. It was stable at temperatures up to 60 °C but declined rapidly at higher temperatures. RH-42-1 remained viable within a pH range of 5 to 9 and was sensitive to extreme pH values. The bacteriophage demonstrates sustained activity upon exposure to ultraviolet radiation for 60 min, albeit with a marginal reduction. In our assays, it exhibited a certain level of resistance to 5% chloroform (CHCl3), 5% isopropanol (C3H8O), and 3% hydrogen peroxide (H2O2), which had little effect on its activity, whereas it showed sensitivity to 75% ethanol (C2H5OH). Electron microscopy revealed that RH-42-1 has a tadpole-shaped morphology. Its genome size is 14,942 bp with a GC content of 48.19%. Based on these characteristics, RH-42-1 was identified as a member of the Tectiviridae family, Alphatectivirus genus. This is the first report of a bacteriophage in this genus with activity against E. amylovora.

Keywords: Alphatectivirus; Erwinia amylovora; RH-42-1; bacteriophage; fire blight; genome; orchard soil; resistance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacteriophages* / classification
  • Bacteriophages* / genetics
  • Bacteriophages* / isolation & purification
  • Bacteriophages* / physiology
  • China
  • Erwinia amylovora* / drug effects
  • Erwinia amylovora* / virology
  • Genome, Viral*
  • Host Specificity*
  • Hydrogen-Ion Concentration
  • Phylogeny
  • Plant Diseases / microbiology
  • Pyrus / microbiology
  • Pyrus / virology
  • Soil Microbiology*