Base sequence of a cloned snake W-chromosome DNA fragment and identification of a male-specific putative mRNA in the mouse

Proc Natl Acad Sci U S A. 1982 Jun;79(12):3798-802. doi: 10.1073/pnas.79.12.3798.

Abstract

A 2.5-kilobase fragment of a sex-specific satellite DNA from the Colubrid snake species Elaphe radiata has been cloned, and its sequence has been determined. It contains 26 and 12 copies, respectively, of two base quadruplets, G-A-T-A and G-A-C-A, as its sole highly repetitious elements. Southern hybridization experiments with genomic DNA of the chicken, the mouse, and man indicated male sex-specific conservation of at least parts of this cloned DNA. In situ hybridization experiments with metaphase chromosomes of the mouse showed that elements that can cross-hybridize with parts of the cloned snake DNA are concentrated in the pericentric region of the Y chromosome. In blot hybridization experiments with liver poly(A)+ polysomal RNAs of male and female mice, a probe consisting of the first 1,224 bases of the cloned snake DNA singled out a male-specific RNA of 1,250-1,400 bases. Inasmuch as the proximal end of this probe contained an open reading frame (44 consecutive amino acid-specifying codons), the male-specific putative mRNA so detected may specify H-Y antigen. By contrast, a probe consisting of bases 1,480-1,906, containing the simple repeats of the quadruplets, singled out a shorter (approximately 1,000-base) RNA from males and females alike. Although this RNA is poly(A)+, we have yet to establish its attachment to ribosomes.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Base Sequence
  • Biological Evolution
  • Chromosome Mapping
  • Cloning, Molecular
  • DNA, Satellite / genetics*
  • Humans
  • Male
  • Mice
  • Nucleic Acid Hybridization
  • Poly A / genetics
  • RNA, Messenger / genetics
  • Sex Chromosomes*
  • Snakes / genetics*
  • Species Specificity
  • Y Chromosome*

Substances

  • DNA, Satellite
  • RNA, Messenger
  • Poly A

Associated data

  • GENBANK/J00967