Characterization of a 2,3-dihydroxybiphenyl dioxygenase from the naphthalenesulfonate-degrading bacterium strain BN6

J Bacteriol. 1995 Oct;177(20):5865-71. doi: 10.1128/jb.177.20.5865-5871.1995.

Abstract

An extradiol dioxygenase was cloned from the naphthalenesulfonate-degrading bacterial strain BN6 by screening a gene bank for colonies with 2,3-dihydroxybiphenyl dioxygenase activity. DNA sequence analysis of a 1,358-bp fragment revealed an open reading frame of only 486 bp. This is the smallest gene encoding an extradiol dioxygenase found until now. Expression of the gene in a T7 expression vector enabled purification of the enzyme. Gel filtration and sodium dodecyl sulfate-polyacrylamide gel electrophoresis analysis showed that the protein was a dimer with a subunit size of 21.7 kDa. The enzyme oxidized 2,3-dihydroxybiphenyl, 3-isopropylcatechol, 3- and 4-chlorocatechol, and 3- and 4-methylcatechol. Since the ability to convert 3-chlorocatechol is an unusual characteristic for an extradiol-cleaving dioxygenase, this reaction was analyzed in more detail. The deduced amino-terminal amino acid sequence differed from the corresponding sequence of the 1,2-dihydroxynaphthalene dioxygenase, which had been determined earlier from the enzyme purified from this strain. This indicates that strain BN6 carries at least two different extradiol dioxygenases.

Publication types

  • Comparative Study

MeSH terms

  • Amino Acid Sequence
  • Bacteria / enzymology
  • Bacteria / genetics*
  • Base Sequence
  • Catechols / metabolism
  • Cloning, Molecular
  • Dioxygenases*
  • Escherichia coli / genetics
  • Genes, Bacterial*
  • Molecular Sequence Data
  • Naphthalenesulfonates / metabolism*
  • Oxidation-Reduction
  • Oxygenases / genetics*
  • Oxygenases / isolation & purification
  • Oxygenases / metabolism
  • Recombinant Proteins / isolation & purification
  • Recombinant Proteins / metabolism
  • Salicylates / metabolism
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Substrate Specificity

Substances

  • Catechols
  • Naphthalenesulfonates
  • Recombinant Proteins
  • Salicylates
  • 3-chlorocatechol
  • Oxygenases
  • Dioxygenases
  • 2,3-dihydroxybiphenyl oxygenase

Associated data

  • GENBANK/U22355