Molecular cloning and nucleotide sequence of chicken avidin-related genes 1-5

Eur J Biochem. 1994 Mar 1;220(2):615-21. doi: 10.1111/j.1432-1033.1994.tb18663.x.

Abstract

Using avidin cDNA as a hybridisation probe, we detected a gene family whose putative products are related to the chicken egg-white avidin. Two overlapping genomic clones were found to contain five genes (avidin-related genes 1-5, avr1-avr5), which have been cloned, characterized and sequenced. All of the genes have a four-exon structure with an overall identity with the avidin cDNA of 88-92%. The genes appear to have no pseudogenic features and, in fact, two of these genes have been shown to be transcribed. The putative proteins share a sequence identity of 68-78% with avidin. The amino acid residues responsible for the biotin-binding activity of avidin and the bacterial biotin-binding protein, streptavidin, are highly conserved. Since avidin is induced in both a progesterone-specific manner and in connection with inflammation, these genes offer a valuable tool to study complex gene regulation in vivo.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Avidin / chemistry
  • Avidin / genetics*
  • Avidin / metabolism
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Biotin / metabolism
  • Chickens / genetics*
  • Cloning, Molecular / methods
  • Conserved Sequence
  • DNA / genetics
  • DNA / isolation & purification
  • Exons
  • Molecular Sequence Data
  • Polymerase Chain Reaction
  • Protein Precursors / chemistry
  • Protein Precursors / genetics
  • Pseudogenes
  • Recombinant Proteins / biosynthesis
  • Recombinant Proteins / metabolism
  • Restriction Mapping
  • Sequence Homology, Amino Acid
  • Sequence Homology, Nucleic Acid
  • Streptavidin
  • Transcription, Genetic

Substances

  • Bacterial Proteins
  • Protein Precursors
  • Recombinant Proteins
  • preavidin
  • Avidin
  • Biotin
  • DNA
  • Streptavidin

Associated data

  • GENBANK/Z21554
  • GENBANK/Z21611
  • GENBANK/Z21612
  • GENBANK/Z22882
  • GENBANK/Z22883